WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.2a.1 Sequence Name  C33D12.2a.1
Length (nt)  2934   Chromosome Location  X: 3036427-3045847
Chromosome . Primary Identifier  X Chromosome Location . Start  3036427
Chromosome Location . End  3045847 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.2a C33D12.2a 2394   X: 3036926-3037063

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2a.1 3036427 3045847 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227443   637   X: 3036427-3037063 Caenorhabditis elegans
Exon227450   64   X: 3037449-3037512 Caenorhabditis elegans
Exon227459   113   X: 3037558-3037670 Caenorhabditis elegans
Exon227468   279   X: 3038530-3038808 Caenorhabditis elegans
Exon227478   168   X: 3038858-3039025 Caenorhabditis elegans
Exon227487   183   X: 3041987-3042169 Caenorhabditis elegans
Exon227494   164   X: 3042314-3042477 Caenorhabditis elegans
Exon227503   274   X: 3043124-3043397 Caenorhabditis elegans
Exon227507   88   X: 3043481-3043568 Caenorhabditis elegans
Exon227511   323   X: 3043615-3043937 Caenorhabditis elegans
Exon227515   145   X: 3044367-3044511 Caenorhabditis elegans
Exon227521   186   X: 3044560-3044745 Caenorhabditis elegans
Exon227527   194   X: 3044798-3044991 Caenorhabditis elegans
Exon227534   116   X: 3045732-3045847 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2a.1 3036427 3045847 -1

1 Sequence

Length
2934

1 Sequence Ontology Term

Identifier Name Description
transcript