WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.2b.4 Sequence Name  C33D12.2b.4
Length (nt)  2732   Chromosome Location  X: 3036514-3044992
Chromosome . Primary Identifier  X Chromosome Location . Start  3036514
Chromosome Location . End  3044992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.2b C33D12.2b 753   X: 3036926-3037063

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2b.4 3036514 3044992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227446   550   X: 3036514-3037063 Caenorhabditis elegans
Exon227454   64   X: 3037449-3037512 Caenorhabditis elegans
Exon227463   113   X: 3037558-3037670 Caenorhabditis elegans
Exon227472   279   X: 3038530-3038808 Caenorhabditis elegans
Exon227482   168   X: 3038858-3039025 Caenorhabditis elegans
Exon227491   183   X: 3041987-3042169 Caenorhabditis elegans
Exon227498   164   X: 3042314-3042477 Caenorhabditis elegans
Exon227505   274   X: 3043124-3043397 Caenorhabditis elegans
Exon227509   88   X: 3043481-3043568 Caenorhabditis elegans
Exon227513   323   X: 3043615-3043937 Caenorhabditis elegans
Exon227519   145   X: 3044367-3044511 Caenorhabditis elegans
Exon227525   186   X: 3044560-3044745 Caenorhabditis elegans
Exon227532   195   X: 3044798-3044992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2b.4 3036514 3044992 -1

1 Sequence

Length
2732

1 Sequence Ontology Term

Identifier Name Description
transcript