WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12D12.1b.1 Sequence Name  C12D12.1b.1
Length (nt)  2109   Chromosome Location  X: 3499253-3505253
Chromosome . Primary Identifier  X Chromosome Location . Start  3499253
Chromosome Location . End  3505253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D12.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015713 C12D12.1 C12D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D12.1b C12D12.1b 1947   X: 3499265-3499286

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.1b.1 3499253 3505253 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228515   34   X: 3499253-3499286 Caenorhabditis elegans
Exon228518   120   X: 3501278-3501397 Caenorhabditis elegans
Exon228520   116   X: 3501450-3501565 Caenorhabditis elegans
Exon228523   151   X: 3501615-3501765 Caenorhabditis elegans
Exon228526   107   X: 3502554-3502660 Caenorhabditis elegans
Exon228529   156   X: 3502704-3502859 Caenorhabditis elegans
Exon228532   85   X: 3502913-3502997 Caenorhabditis elegans
Exon228535   104   X: 3503120-3503223 Caenorhabditis elegans
Exon228538   122   X: 3503271-3503392 Caenorhabditis elegans
Exon228541   377   X: 3503436-3503812 Caenorhabditis elegans
Exon228544   101   X: 3503869-3503969 Caenorhabditis elegans
Exon228547   82   X: 3504016-3504097 Caenorhabditis elegans
Exon228551   554   X: 3504700-3505253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.1b.1 3499253 3505253 1

1 Sequence

Length
2109

1 Sequence Ontology Term

Identifier Name Description
transcript