WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C12D12.1a.1 Sequence Name  C12D12.1a.1
Length (nt)  2558   Chromosome Location  X: 3501165-3505260
Chromosome . Primary Identifier  X Chromosome Location . Start  3501165
Chromosome Location . End  3505260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C12D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015713 C12D12.1 C12D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C12D12.1a C12D12.1a 2310   X: 3501256-3501397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.1a.1 3501165 3505260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228517   233   X: 3501165-3501397 Caenorhabditis elegans
Exon228519   116   X: 3501450-3501565 Caenorhabditis elegans
Exon228522   151   X: 3501615-3501765 Caenorhabditis elegans
Exon228525   107   X: 3502554-3502660 Caenorhabditis elegans
Exon228528   156   X: 3502704-3502859 Caenorhabditis elegans
Exon228531   85   X: 3502913-3502997 Caenorhabditis elegans
Exon228534   104   X: 3503120-3503223 Caenorhabditis elegans
Exon228537   122   X: 3503271-3503392 Caenorhabditis elegans
Exon228540   377   X: 3503436-3503812 Caenorhabditis elegans
Exon228543   101   X: 3503869-3503969 Caenorhabditis elegans
Exon228546   82   X: 3504016-3504097 Caenorhabditis elegans
Exon228549   363   X: 3504266-3504628 Caenorhabditis elegans
Exon228552   561   X: 3504700-3505260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C12D12.1a.1 3501165 3505260 1

1 Sequence

Length
2558

1 Sequence Ontology Term

Identifier Name Description
transcript