WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59D8.2.1 Sequence Name  F59D8.2.1
Length (nt)  4936   Chromosome Location  X: 3558769-3563965
Chromosome . Primary Identifier  X Chromosome Location . Start  3558769
Chromosome Location . End  3563965 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59D8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59D8.2 F59D8.2 4812   X: 3558893-3559152

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59D8.2.1 3558769 3563965 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228749   384   X: 3558769-3559152 Caenorhabditis elegans
Exon228750   136   X: 3559205-3559340 Caenorhabditis elegans
Exon228751   229   X: 3559390-3559618 Caenorhabditis elegans
Exon228752   3038   X: 3559668-3562705 Caenorhabditis elegans
Exon228753   285   X: 3562753-3563037 Caenorhabditis elegans
Exon228754   864   X: 3563102-3563965 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59D8.2.1 3558769 3563965 -1

1 Sequence

Length
4936

1 Sequence Ontology Term

Identifier Name Description
transcript