WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35A5.3.1 Sequence Name  F35A5.3.1
Length (nt)  1268   Chromosome Location  X: 3798182-3799741
Chromosome . Primary Identifier  X Chromosome Location . Start  3798182
Chromosome Location . End  3799741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35A5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35A5.3 F35A5.3 1128   X: 3798223-3798264

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35A5.3.1 3798182 3799741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229364   83   X: 3798182-3798264 Caenorhabditis elegans
Exon229365   342   X: 3798322-3798663 Caenorhabditis elegans
Exon229366   177   X: 3798713-3798889 Caenorhabditis elegans
Exon229367   87   X: 3798935-3799021 Caenorhabditis elegans
Exon229368   90   X: 3799064-3799153 Caenorhabditis elegans
Exon229369   114   X: 3799198-3799311 Caenorhabditis elegans
Exon229370   375   X: 3799367-3799741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35A5.3.1 3798182 3799741 1

1 Sequence

Length
1268

1 Sequence Ontology Term

Identifier Name Description
transcript