WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02E12.8.1 Sequence Name  R02E12.8.1
Length (nt)  1743   Chromosome Location  X: 4022267-4025641
Chromosome . Primary Identifier  X Chromosome Location . Start  4022267
Chromosome Location . End  4025641 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02E12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000049 acr-10 R02E12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02E12.8 R02E12.8 1674   X: 4022279-4022373

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.8.1 4022267 4025641 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229822   107   X: 4022267-4022373 Caenorhabditis elegans
Exon229823   103   X: 4022423-4022525 Caenorhabditis elegans
Exon229824   45   X: 4023328-4023372 Caenorhabditis elegans
Exon229825   334   X: 4023421-4023754 Caenorhabditis elegans
Exon229826   136   X: 4023806-4023941 Caenorhabditis elegans
Exon229827   116   X: 4023987-4024102 Caenorhabditis elegans
Exon229828   87   X: 4024148-4024234 Caenorhabditis elegans
Exon229829   242   X: 4024686-4024927 Caenorhabditis elegans
Exon229830   104   X: 4024983-4025086 Caenorhabditis elegans
Exon229831   176   X: 4025130-4025305 Caenorhabditis elegans
Exon229832   293   X: 4025349-4025641 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02E12.8.1 4022267 4025641 1

1 Sequence

Length
1743

1 Sequence Ontology Term

Identifier Name Description
transcript