WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK470.5a Sequence Name  ZK470.5a
Length (nt)  1188   Chromosome Location  X: 4149066-4149260
Chromosome . Primary Identifier  X Chromosome Location . Start  4149066
Chromosome Location . End  4149260
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK470.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31270 NCK-1, isoform a 44.2 395 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00107728
WBRNAi00059443
WBRNAi00109201
WBRNAi00116137
WBRNAi00022023
WBRNAi00109590
WBRNAi00038301
WBRNAi00109299
WBRNAi00088593
WBRNAi00088700
WBRNAi00109493
WBRNAi00109396

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK470.5a 4149066 4149260 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006410 nck-1 ZK470.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK470.5a 4149066 4149260 -1
CDS:ZK470.5a 4149841 4150026 -1
CDS:ZK470.5a 4150096 4150260 -1
CDS:ZK470.5a 4150308 4150622 -1
CDS:ZK470.5a 4150680 4150757 -1
CDS:ZK470.5a 4152543 4152674 -1
CDS:ZK470.5a 4153303 4153419 -1

1 Sequence

Length
1188

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK470.5a.1 ZK470.5a.1 1626   X: 4148652-4153443