WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01H2.3a.4 Sequence Name  W01H2.3a.4
Length (nt)  1308   Chromosome Location  X: 4227810-4231221
Chromosome . Primary Identifier  X Chromosome Location . Start  4227810
Chromosome Location . End  4231221 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01H2.3a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004285 rab-37 W01H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01H2.3a W01H2.3a 576   X: 4228528-4228639

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3a.4 4227810 4231221 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230140   830   X: 4227810-4228639 Caenorhabditis elegans
Exon230148   77   X: 4228786-4228862 Caenorhabditis elegans
Exon230154   117   X: 4229991-4230107 Caenorhabditis elegans
Exon230160   120   X: 4230155-4230274 Caenorhabditis elegans
Exon230166   42   X: 4230322-4230363 Caenorhabditis elegans
Exon230174   122   X: 4231100-4231221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3a.4 4227810 4231221 -1

1 Sequence

Length
1308

1 Sequence Ontology Term

Identifier Name Description
transcript