WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01H2.3c.1 Sequence Name  W01H2.3c.1
Length (nt)  636   Chromosome Location  X: 4228528-4235812
Chromosome . Primary Identifier  X Chromosome Location . Start  4228528
Chromosome Location . End  4235812 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01H2.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004285 rab-37 W01H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01H2.3c W01H2.3c 636   X: 4228528-4228639

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3c.1 4228528 4235812 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230144   112   X: 4228528-4228639 Caenorhabditis elegans
Exon230150   77   X: 4228786-4228862 Caenorhabditis elegans
Exon230156   117   X: 4229991-4230107 Caenorhabditis elegans
Exon230162   120   X: 4230155-4230274 Caenorhabditis elegans
Exon230168   42   X: 4230322-4230363 Caenorhabditis elegans
Exon230173   111   X: 4231100-4231210 Caenorhabditis elegans
Exon230178   57   X: 4235756-4235812 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01H2.3c.1 4228528 4235812 -1

1 Sequence

Length
636

1 Sequence Ontology Term

Identifier Name Description
transcript