WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52B9.5 Sequence Name  C52B9.5
Length (nt)  993   Chromosome Location  X: 4257061-4257198
Chromosome . Primary Identifier  X Chromosome Location . Start  4257061
Chromosome Location . End  4257198
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45131 SRV-6 37.7 330 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043015
WBRNAi00012296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52B9.5 4257061 4257198 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005717 srv-6 C52B9.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52B9.5 4257061 4257198 1
CDS:C52B9.5 4257248 4257394 1
CDS:C52B9.5 4257884 4257973 1
CDS:C52B9.5 4258019 4258174 1
CDS:C52B9.5 4258221 4258334 1
CDS:C52B9.5 4258610 4258764 1
CDS:C52B9.5 4258852 4258959 1
CDS:C52B9.5 4259010 4259094 1

1 Sequence

Length
993

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52B9.5.1 C52B9.5.1 1220   X: 4257061-4259321