WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24A8.1.1 Sequence Name  C24A8.1.1
Length (nt)  2079   Chromosome Location  X: 4320863-4327331
Chromosome . Primary Identifier  X Chromosome Location . Start  4320863
Chromosome Location . End  4327331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24A8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016037 dop-6 C24A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24A8.1 C24A8.1 2079   X: 4320863-4321045

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.1.1 4320863 4327331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230415   183   X: 4320863-4321045 Caenorhabditis elegans
Exon230416   66   X: 4321093-4321158 Caenorhabditis elegans
Exon230418   113   X: 4321209-4321321 Caenorhabditis elegans
Exon230419   298   X: 4321367-4321664 Caenorhabditis elegans
Exon230420   79   X: 4321721-4321799 Caenorhabditis elegans
Exon230421   113   X: 4321856-4321968 Caenorhabditis elegans
Exon230422   66   X: 4322923-4322988 Caenorhabditis elegans
Exon230423   110   X: 4323057-4323166 Caenorhabditis elegans
Exon230424   172   X: 4323228-4323399 Caenorhabditis elegans
Exon230425   141   X: 4324989-4325129 Caenorhabditis elegans
Exon230426   97   X: 4325530-4325626 Caenorhabditis elegans
Exon230427   170   X: 4325676-4325845 Caenorhabditis elegans
Exon230428   98   X: 4326165-4326262 Caenorhabditis elegans
Exon230429   72   X: 4326309-4326380 Caenorhabditis elegans
Exon230430   105   X: 4326730-4326834 Caenorhabditis elegans
Exon230431   90   X: 4327087-4327176 Caenorhabditis elegans
Exon230432   106   X: 4327226-4327331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24A8.1.1 4320863 4327331 1

1 Sequence

Length
2079

1 Sequence Ontology Term

Identifier Name Description
transcript