WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R160.7 Sequence Name  R160.7
Length (nt)  1986   Chromosome Location  X: 4378637-4378780
Chromosome . Primary Identifier  X Chromosome Location . Start  4378637
Chromosome Location . End  4378780
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R160.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33815 LST-2 74.5 661 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00051996
WBRNAi00017882
WBRNAi00078913
WBRNAi00034945
WBRNAi00078214
WBRNAi00098078
WBRNAi00078917
WBRNAi00087646

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R160.7 4378637 4378780 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003084 lst-2 R160.7 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:R160.7 4378637 4378780 -1
CDS:R160.7 4379118 4379281 -1
CDS:R160.7 4379403 4379490 -1
CDS:R160.7 4379537 4379717 -1
CDS:R160.7 4379903 4380879 -1
CDS:R160.7 4380932 4381042 -1
CDS:R160.7 4381572 4381693 -1
CDS:R160.7 4382038 4382139 -1
CDS:R160.7 4383262 4383358 -1

1 Sequence

Length
1986

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R160.7.1 R160.7.1 2627   X: 4378004-4383366