WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D1079.1a Sequence Name  D1079.1a
Length (nt)  801   Chromosome Location  X: 4403215-4403282
Chromosome . Primary Identifier  X Chromosome Location . Start  4403215
Chromosome Location . End  4403282
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1079.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47131 D1079.1, isoform a 30.4 266 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043409
WBRNAi00012548
WBRNAi00030358

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D1079.1a 4403215 4403282 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017040 D1079.1 D1079.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:D1079.1a 4403215 4403282 1
CDS:D1079.1a 4405389 4405570 1
CDS:D1079.1a 4405632 4405773 1
CDS:D1079.1a 4406679 4406865 1
CDS:D1079.1a 4406924 4407145 1

1 Sequence

Length
801

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D1079.1a.1 D1079.1a.1 2711   X: 4403159-4409254