WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F02E8.6 Sequence Name  F02E8.6
Length (nt)  4152   Chromosome Location  X: 4472732-4472835
Chromosome . Primary Identifier  X Chromosome Location . Start  4472732
Chromosome Location . End  4472835
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E8.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29251 NCR-1 155.4 1383 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00043823
WBRNAi00012787
WBRNAi00084741
WBRNAi00098193
WBRNAi00030580
WBRNAi00068491
WBRNAi00068492
WBRNAi00064532
WBRNAi00068933
WBRNAi00068935
WBRNAi00068934
WBRNAi00068936

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F02E8.6 4472732 4472835 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003561 ncr-1 F02E8.6 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F02E8.6 4472732 4472835 -1
CDS:F02E8.6 4473282 4473409 -1
CDS:F02E8.6 4473459 4473616 -1
CDS:F02E8.6 4473663 4473851 -1
CDS:F02E8.6 4473904 4474330 -1
CDS:F02E8.6 4474390 4474871 -1
CDS:F02E8.6 4474916 4475005 -1
CDS:F02E8.6 4475281 4475564 -1
CDS:F02E8.6 4475621 4476327 -1
CDS:F02E8.6 4476407 4476537 -1
CDS:F02E8.6 4476591 4476834 -1
CDS:F02E8.6 4477024 4477301 -1
CDS:F02E8.6 4477357 4477479 -1
CDS:F02E8.6 4478110 4478262 -1
CDS:F02E8.6 4478309 4478590 -1
CDS:F02E8.6 4478843 4479003 -1
CDS:F02E8.6 4479866 4480076 -1

1 Sequence

Length
4152

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F02E8.6.2 F02E8.6.2 4687   X: 4472244-4480123
Transcript:F02E8.6.1 F02E8.6.1 4752   X: 4472244-4488857