WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05E11.1b.1 Sequence Name  C05E11.1b.1
Length (nt)  1303   Chromosome Location  X: 4588762-4590446
Chromosome . Primary Identifier  X Chromosome Location . Start  4588762
Chromosome Location . End  4590446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05E11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015492 lnp-1 C05E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05E11.1b C05E11.1b 1041   X: 4588768-4588869

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05E11.1b.1 4588762 4590446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231061   108   X: 4588762-4588869 Caenorhabditis elegans
Exon231064   273   X: 4588919-4589191 Caenorhabditis elegans
Exon231066   195   X: 4589247-4589441 Caenorhabditis elegans
Exon231068   122   X: 4589627-4589748 Caenorhabditis elegans
Exon231070   120   X: 4589804-4589923 Caenorhabditis elegans
Exon231071   485   X: 4589962-4590446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05E11.1b.1 4588762 4590446 1

1 Sequence

Length
1303

1 Sequence Ontology Term

Identifier Name Description
transcript