WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F16H11.1.1 Sequence Name  F16H11.1.1
Length (nt)  1679   Chromosome Location  X: 4668088-4673234
Chromosome . Primary Identifier  X Chromosome Location . Start  4668088
Chromosome Location . End  4673234 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16H11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017530 mfsd-12 F16H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F16H11.1 F16H11.1 1506   X: 4668089-4668142

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F16H11.1.1 4668088 4673234 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231281   55   X: 4668088-4668142 Caenorhabditis elegans
Exon231282   67   X: 4668198-4668264 Caenorhabditis elegans
Exon231283   122   X: 4668313-4668434 Caenorhabditis elegans
Exon231284   106   X: 4670359-4670464 Caenorhabditis elegans
Exon231285   140   X: 4670511-4670650 Caenorhabditis elegans
Exon231286   71   X: 4671094-4671164 Caenorhabditis elegans
Exon231287   112   X: 4671210-4671321 Caenorhabditis elegans
Exon231288   92   X: 4671391-4671482 Caenorhabditis elegans
Exon231289   85   X: 4671528-4671612 Caenorhabditis elegans
Exon231290   93   X: 4671660-4671752 Caenorhabditis elegans
Exon231291   96   X: 4671796-4671891 Caenorhabditis elegans
Exon231292   168   X: 4671939-4672106 Caenorhabditis elegans
Exon231293   98   X: 4672652-4672749 Caenorhabditis elegans
Exon231294   143   X: 4672806-4672948 Caenorhabditis elegans
Exon231295   231   X: 4673004-4673234 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F16H11.1.1 4668088 4673234 1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript