WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D10.1.1 Sequence Name  F55D10.1.1
Length (nt)  2972   Chromosome Location  X: 4733095-4738592
Chromosome . Primary Identifier  X Chromosome Location . Start  4733095
Chromosome Location . End  4738592 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018877 aman-1 F55D10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D10.1 F55D10.1 2868   X: 4733100-4733171

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55D10.1.1 4733095 4738592 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231439   77   X: 4733095-4733171 Caenorhabditis elegans
Exon231440   109   X: 4733898-4734006 Caenorhabditis elegans
Exon231441   82   X: 4734062-4734143 Caenorhabditis elegans
Exon231442   187   X: 4734197-4734383 Caenorhabditis elegans
Exon231443   99   X: 4734522-4734620 Caenorhabditis elegans
Exon231444   109   X: 4734671-4734779 Caenorhabditis elegans
Exon231445   167   X: 4734827-4734993 Caenorhabditis elegans
Exon231446   117   X: 4735339-4735455 Caenorhabditis elegans
Exon231447   305   X: 4735504-4735808 Caenorhabditis elegans
Exon231448   70   X: 4735851-4735920 Caenorhabditis elegans
Exon231449   101   X: 4735971-4736071 Caenorhabditis elegans
Exon231450   130   X: 4736116-4736245 Caenorhabditis elegans
Exon231451   186   X: 4736637-4736822 Caenorhabditis elegans
Exon231452   207   X: 4736869-4737075 Caenorhabditis elegans
Exon231453   125   X: 4737127-4737251 Caenorhabditis elegans
Exon231454   102   X: 4737293-4737394 Caenorhabditis elegans
Exon231455   166   X: 4737450-4737615 Caenorhabditis elegans
Exon231456   123   X: 4737664-4737786 Caenorhabditis elegans
Exon231457   246   X: 4737989-4738234 Caenorhabditis elegans
Exon231458   79   X: 4738283-4738361 Caenorhabditis elegans
Exon231459   185   X: 4738408-4738592 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55D10.1.1 4733095 4738592 1

1 Sequence

Length
2972

1 Sequence Ontology Term

Identifier Name Description
transcript