WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K05B2.3.1 Sequence Name  K05B2.3.1
Length (nt)  2035   Chromosome Location  X: 4912308-4915979
Chromosome . Primary Identifier  X Chromosome Location . Start  4912308
Chromosome Location . End  4915979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K05B2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002052 ifa-4 K05B2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K05B2.3 K05B2.3 1728   X: 4912612-4912650

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.3.1 4912308 4915979 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232014   343   X: 4912308-4912650 Caenorhabditis elegans
Exon232015   276   X: 4912712-4912987 Caenorhabditis elegans
Exon232016   80   X: 4913356-4913435 Caenorhabditis elegans
Exon232017   289   X: 4913887-4914175 Caenorhabditis elegans
Exon232018   174   X: 4914225-4914398 Caenorhabditis elegans
Exon232019   114   X: 4914447-4914560 Caenorhabditis elegans
Exon232020   96   X: 4914606-4914701 Caenorhabditis elegans
Exon232021   285   X: 4914745-4915029 Caenorhabditis elegans
Exon232022   284   X: 4915086-4915369 Caenorhabditis elegans
Exon232023   94   X: 4915886-4915979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K05B2.3.1 4912308 4915979 -1

1 Sequence

Length
2035

1 Sequence Ontology Term

Identifier Name Description
transcript