WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.4b.1 Sequence Name  Y34B4A.4b.1
Length (nt)  2502   Chromosome Location  X: 5264330-5271414
Chromosome . Primary Identifier  X Chromosome Location . Start  5264330
Chromosome Location . End  5271414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021320 Y34B4A.4 Y34B4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.4b Y34B4A.4b 2502   X: 5264330-5264405

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.4b.1 5264330 5271414 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232948   76   X: 5264330-5264405 Caenorhabditis elegans
Exon232950   65   X: 5264695-5264759 Caenorhabditis elegans
Exon232952   102   X: 5264812-5264913 Caenorhabditis elegans
Exon232954   143   X: 5264968-5265110 Caenorhabditis elegans
Exon232956   115   X: 5265157-5265271 Caenorhabditis elegans
Exon232958   471   X: 5265325-5265795 Caenorhabditis elegans
Exon232960   126   X: 5266923-5267048 Caenorhabditis elegans
Exon232962   89   X: 5267272-5267360 Caenorhabditis elegans
Exon232964   53   X: 5267409-5267461 Caenorhabditis elegans
Exon232967   107   X: 5268796-5268902 Caenorhabditis elegans
Exon232969   132   X: 5268956-5269087 Caenorhabditis elegans
Exon232971   140   X: 5269421-5269560 Caenorhabditis elegans
Exon232973   189   X: 5269620-5269808 Caenorhabditis elegans
Exon232975   78   X: 5269859-5269936 Caenorhabditis elegans
Exon232977   169   X: 5269990-5270158 Caenorhabditis elegans
Exon232979   90   X: 5270208-5270297 Caenorhabditis elegans
Exon232981   200   X: 5270369-5270568 Caenorhabditis elegans
Exon232983   157   X: 5271258-5271414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.4b.1 5264330 5271414 1

1 Sequence

Length
2502

1 Sequence Ontology Term

Identifier Name Description
transcript