WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4f.2 Sequence Name  F32A6.4f.2
Length (nt)  1579   Chromosome Location  X: 5289727-5295929
Chromosome . Primary Identifier  X Chromosome Location . Start  5289727
Chromosome Location . End  5295929 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4f.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4f F32A6.4f 477   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.2 5289727 5295929 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233182   497   X: 5289727-5290223 Caenorhabditis elegans
Exon233198   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233211   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233222   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233233   105   X: 5292671-5292775 Caenorhabditis elegans
Exon233244   93   X: 5292982-5293074 Caenorhabditis elegans
Exon233254   161   X: 5293576-5293736 Caenorhabditis elegans
Exon233263   104   X: 5295579-5295682 Caenorhabditis elegans
Exon233272   201   X: 5295729-5295929 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.2 5289727 5295929 -1

1 Sequence

Length
1579

1 Sequence Ontology Term

Identifier Name Description
transcript