WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4f.4 Sequence Name  F32A6.4f.4
Length (nt)  1117   Chromosome Location  X: 5289728-5293079
Chromosome . Primary Identifier  X Chromosome Location . Start  5289728
Chromosome Location . End  5293079 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4f.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4f F32A6.4f 477   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.4 5289728 5293079 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233183   496   X: 5289728-5290223 Caenorhabditis elegans
Exon233200   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233213   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233224   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233235   105   X: 5292671-5292775 Caenorhabditis elegans
Exon233248   98   X: 5292982-5293079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.4 5289728 5293079 -1

1 Sequence

Length
1117

1 Sequence Ontology Term

Identifier Name Description
transcript