WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4f.5 Sequence Name  F32A6.4f.5
Length (nt)  1015   Chromosome Location  X: 5289737-5292780
Chromosome . Primary Identifier  X Chromosome Location . Start  5289737
Chromosome Location . End  5292780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4f.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4f F32A6.4f 477   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.5 5289737 5292780 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233186   487   X: 5289737-5290223 Caenorhabditis elegans
Exon233201   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233214   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233225   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233238   110   X: 5292671-5292780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.5 5289737 5292780 -1

1 Sequence

Length
1015

1 Sequence Ontology Term

Identifier Name Description
transcript