WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4f.1 Sequence Name  F32A6.4f.1
Length (nt)  2267   Chromosome Location  X: 5289801-5298042
Chromosome . Primary Identifier  X Chromosome Location . Start  5289801
Chromosome Location . End  5298042 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4f F32A6.4f 477   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.1 5289801 5298042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233187   423   X: 5289801-5290223 Caenorhabditis elegans
Exon233197   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233210   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233221   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233232   105   X: 5292671-5292775 Caenorhabditis elegans
Exon233243   93   X: 5292982-5293074 Caenorhabditis elegans
Exon233253   161   X: 5293576-5293736 Caenorhabditis elegans
Exon233262   104   X: 5295579-5295682 Caenorhabditis elegans
Exon233269   116   X: 5295729-5295844 Caenorhabditis elegans
Exon233275   124   X: 5296640-5296763 Caenorhabditis elegans
Exon233280   146   X: 5296812-5296957 Caenorhabditis elegans
Exon233283   201   X: 5297205-5297405 Caenorhabditis elegans
Exon233287   136   X: 5297565-5297700 Caenorhabditis elegans
Exon233292   151   X: 5297748-5297898 Caenorhabditis elegans
Exon233298   89   X: 5297954-5298042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.1 5289801 5298042 -1

1 Sequence

Length
2267

1 Sequence Ontology Term

Identifier Name Description
transcript