WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C25F6.4 Sequence Name  C25F6.4
Length (nt)  2301   Chromosome Location  X: 5461256-5461319
Chromosome . Primary Identifier  X Chromosome Location . Start  5461256
Chromosome Location . End  5461319
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F6.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45027 DDR-1 86.2 766 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00041195
WBRNAi00011168
WBRNAi00091029

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C25F6.4 5461256 5461319 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016104 ddr-1 C25F6.4 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C25F6.4 5461256 5461319 1
CDS:C25F6.4 5461384 5461568 1
CDS:C25F6.4 5461616 5461768 1
CDS:C25F6.4 5462277 5462424 1
CDS:C25F6.4 5462476 5462584 1
CDS:C25F6.4 5462743 5462843 1
CDS:C25F6.4 5462888 5462993 1
CDS:C25F6.4 5463293 5463370 1
CDS:C25F6.4 5463420 5463526 1
CDS:C25F6.4 5463574 5463740 1
CDS:C25F6.4 5464098 5464411 1
CDS:C25F6.4 5464461 5464760 1
CDS:C25F6.4 5465486 5465681 1
CDS:C25F6.4 5465737 5465886 1
CDS:C25F6.4 5465941 5466063 1

1 Sequence

Length
2301

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C25F6.4.1 C25F6.4.1 3049   X: 5461230-5466785