WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4d.1 Sequence Name  F14D12.4d.1
Length (nt)  4053   Chromosome Location  X: 5573035-5590820
Chromosome . Primary Identifier  X Chromosome Location . Start  5573035
Chromosome Location . End  5590820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4d F14D12.4d 3543   X: 5573152-5573296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4d.1 5573035 5590820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234197   262   X: 5573035-5573296 Caenorhabditis elegans
Exon234220   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234237   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234254   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234271   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234288   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234305   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234322   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234341   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234354   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234368   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234386   2340   X: 5587988-5590327 Caenorhabditis elegans
Exon234393   344   X: 5590477-5590820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4d.1 5573035 5590820 1

1 Sequence

Length
4053

1 Sequence Ontology Term

Identifier Name Description
transcript