WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4n.1 Sequence Name  F14D12.4n.1
Length (nt)  1500   Chromosome Location  X: 5575969-5588045
Chromosome . Primary Identifier  X Chromosome Location . Start  5575969
Chromosome Location . End  5588045 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4n F14D12.4n 1500   X: 5575969-5576190

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4n.1 5575969 5588045 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234202   222   X: 5575969-5576190 Caenorhabditis elegans
Exon234207   100   X: 5576247-5576346 Caenorhabditis elegans
Exon234230   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234247   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234264   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234281   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234298   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234315   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234332   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234350   161   X: 5586251-5586411 Caenorhabditis elegans
Exon234362   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234376   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234380   58   X: 5587988-5588045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4n.1 5575969 5588045 1

1 Sequence

Length
1500

1 Sequence Ontology Term

Identifier Name Description
transcript