WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R07E4.1a Sequence Name  R07E4.1a
Length (nt)  3405   Chromosome Location  X: 5959115-5959236
Chromosome . Primary Identifier  X Chromosome Location . Start  5959115
Chromosome Location . End  5959236
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53590 R07E4.1, isoform a 130.7 1134 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001497
WBRNAi00051471
WBRNAi00051472
WBRNAi00017552
WBRNAi00076601
WBRNAi00034709

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R07E4.1a 5959115 5959236 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019935 R07E4.1 R07E4.1 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:R07E4.1a 5959115 5959236 1
CDS:R07E4.1a 5961222 5961311 1
CDS:R07E4.1a 5961425 5961495 1
CDS:R07E4.1a 5963387 5963537 1
CDS:R07E4.1a 5963933 5963970 1
CDS:R07E4.1a 5964766 5964876 1
CDS:R07E4.1a 5965608 5965811 1
CDS:R07E4.1a 5965869 5965963 1
CDS:R07E4.1a 5966385 5966574 1
CDS:R07E4.1a 5966641 5966829 1
CDS:R07E4.1a 5966875 5966982 1
CDS:R07E4.1a 5967038 5967128 1
CDS:R07E4.1a 5967172 5967381 1
CDS:R07E4.1a 5967583 5967867 1
CDS:R07E4.1a 5967910 5968054 1
CDS:R07E4.1a 5968123 5968302 1
CDS:R07E4.1a 5968348 5968462 1
CDS:R07E4.1a 5968509 5968672 1
CDS:R07E4.1a 5968724 5968800 1
CDS:R07E4.1a 5968854 5969150 1
CDS:R07E4.1a 5969427 5969658 1
CDS:R07E4.1a 5969699 5969938 1

1 Sequence

Length
3405

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R07E4.1a.1 R07E4.1a.1 3740   X: 5959115-5970273