WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C45B2.6.2 Sequence Name  C45B2.6.2
Length (nt)  2769   Chromosome Location  X: 6052879-6057315
Chromosome . Primary Identifier  X Chromosome Location . Start  6052879
Chromosome Location . End  6057315 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C45B2.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016661 C45B2.6 C45B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C45B2.6 C45B2.6 2289   X: 6053100-6053216

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.2 6052879 6057315 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235573   131   X: 6052879-6053009 Caenorhabditis elegans
Exon235574   159   X: 6053058-6053216 Caenorhabditis elegans
Exon235577   117   X: 6053452-6053568 Caenorhabditis elegans
Exon235579   230   X: 6053612-6053841 Caenorhabditis elegans
Exon235581   175   X: 6053897-6054071 Caenorhabditis elegans
Exon235583   112   X: 6054407-6054518 Caenorhabditis elegans
Exon235585   91   X: 6054563-6054653 Caenorhabditis elegans
Exon235587   97   X: 6054702-6054798 Caenorhabditis elegans
Exon235589   85   X: 6054843-6054927 Caenorhabditis elegans
Exon235591   270   X: 6054971-6055240 Caenorhabditis elegans
Exon235593   257   X: 6055290-6055546 Caenorhabditis elegans
Exon235595   254   X: 6055623-6055876 Caenorhabditis elegans
Exon235597   271   X: 6055925-6056195 Caenorhabditis elegans
Exon235599   156   X: 6056747-6056902 Caenorhabditis elegans
Exon235601   364   X: 6056952-6057315 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C45B2.6.2 6052879 6057315 1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
transcript