WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C5.1b.1 Sequence Name  T13C5.1b.1
Length (nt)  1674   Chromosome Location  X: 6198094-6200604
Chromosome . Primary Identifier  X Chromosome Location . Start  6198094
Chromosome Location . End  6200604 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C5.1b T13C5.1b 1674   X: 6198094-6198156

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1b.1 6198094 6200604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236085   63   X: 6198094-6198156 Caenorhabditis elegans
Exon236087   337   X: 6198338-6198674 Caenorhabditis elegans
Exon236090   57   X: 6198728-6198784 Caenorhabditis elegans
Exon236093   224   X: 6199095-6199318 Caenorhabditis elegans
Exon236096   138   X: 6199367-6199504 Caenorhabditis elegans
Exon236099   116   X: 6199549-6199664 Caenorhabditis elegans
Exon236102   99   X: 6199714-6199812 Caenorhabditis elegans
Exon236105   255   X: 6199866-6200120 Caenorhabditis elegans
Exon236108   281   X: 6200172-6200452 Caenorhabditis elegans
Exon236110   104   X: 6200501-6200604 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13C5.1b.1 6198094 6200604 1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
transcript