WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22E5.2b.1 Sequence Name  T22E5.2b.1
Length (nt)  1761   Chromosome Location  X: 6403422-6406981
Chromosome . Primary Identifier  X Chromosome Location . Start  6403422
Chromosome Location . End  6406981 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22E5.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001622 glt-4 T22E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22E5.2b T22E5.2b 1437   X: 6403430-6403629

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22E5.2b.1 6403422 6406981 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236598   208   X: 6403422-6403629 Caenorhabditis elegans
Exon236600   98   X: 6404319-6404416 Caenorhabditis elegans
Exon236602   127   X: 6404474-6404600 Caenorhabditis elegans
Exon236604   116   X: 6404646-6404761 Caenorhabditis elegans
Exon236606   190   X: 6404807-6404996 Caenorhabditis elegans
Exon236608   157   X: 6405044-6405200 Caenorhabditis elegans
Exon236610   173   X: 6405749-6405921 Caenorhabditis elegans
Exon236612   149   X: 6405969-6406117 Caenorhabditis elegans
Exon236614   174   X: 6406167-6406340 Caenorhabditis elegans
Exon236615   75   X: 6406430-6406504 Caenorhabditis elegans
Exon236616   294   X: 6406688-6406981 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22E5.2b.1 6403422 6406981 1

1 Sequence

Length
1761

1 Sequence Ontology Term

Identifier Name Description
transcript