WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C15B12.5e Sequence Name  C15B12.5e
Length (nt)  2040   Chromosome Location  X: 6479638-6479814
Chromosome . Primary Identifier  X Chromosome Location . Start  6479638
Chromosome Location . End  6479814
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15B12.5e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53443 GAR-1, isoform e 76.5 679 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00040586
WBRNAi00075430
WBRNAi00010779

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C15B12.5e 6479638 6479814 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001517 gar-1 C15B12.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:C15B12.5e 6479638 6479814 -1
CDS:C15B12.5e 6479865 6479922 -1
CDS:C15B12.5e 6479970 6480098 -1
CDS:C15B12.5e 6480246 6480416 -1
CDS:C15B12.5e 6480681 6480817 -1
CDS:C15B12.5e 6481752 6481862 -1
CDS:C15B12.5e 6481907 6482117 -1
CDS:C15B12.5e 6482168 6482317 -1
CDS:C15B12.5e 6482366 6482439 -1
CDS:C15B12.5e 6483095 6483187 -1
CDS:C15B12.5e 6483244 6483339 -1
CDS:C15B12.5e 6483394 6483505 -1
CDS:C15B12.5e 6483553 6483691 -1
CDS:C15B12.5e 6483873 6483989 -1
CDS:C15B12.5e 6484036 6484126 -1
CDS:C15B12.5e 6484239 6484340 -1
CDS:C15B12.5e 6484739 6484810 -1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C15B12.5e.1 C15B12.5e.1 2040   X: 6479638-6484810