WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T14E8.1b Sequence Name  T14E8.1b
Length (nt)  3093   Chromosome Location  X: 6553316-6553489
Chromosome . Primary Identifier  X Chromosome Location . Start  6553316
Chromosome Location . End  6553489
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14E8.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29341 SVH-2, isoform b 116.8 1030 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00053322
WBRNAi00018710
WBRNAi00086148

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T14E8.1b 6553316 6553489 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020504 svh-2 T14E8.1 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:T14E8.1b 6553316 6553489 1
CDS:T14E8.1b 6554127 6554208 1
CDS:T14E8.1b 6554265 6554373 1
CDS:T14E8.1b 6554421 6554624 1
CDS:T14E8.1b 6554670 6554920 1
CDS:T14E8.1b 6554968 6555056 1
CDS:T14E8.1b 6555106 6555321 1
CDS:T14E8.1b 6555366 6555472 1
CDS:T14E8.1b 6555652 6555754 1
CDS:T14E8.1b 6555802 6555921 1
CDS:T14E8.1b 6555967 6556155 1
CDS:T14E8.1b 6556204 6556325 1
CDS:T14E8.1b 6556372 6556764 1
CDS:T14E8.1b 6557008 6557189 1
CDS:T14E8.1b 6557242 6557494 1
CDS:T14E8.1b 6557542 6557680 1
CDS:T14E8.1b 6557777 6557943 1
CDS:T14E8.1b 6558499 6558640 1
CDS:T14E8.1b 6558888 6558938 1

1 Sequence

Length
3093

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T14E8.1b.1 T14E8.1b.1 3648   X: 6553288-6559465
Transcript:T14E8.1b.2 T14E8.1b.2 3461   X: 6553316-6564207