WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28B4.1c.1 Sequence Name  T28B4.1c.1
Length (nt)  1841   Chromosome Location  X: 6588795-6596139
Chromosome . Primary Identifier  X Chromosome Location . Start  6588795
Chromosome Location . End  6596139 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28B4.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020884 fbxl-4 T28B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28B4.1c T28B4.1c 1659   X: 6588834-6588872

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28B4.1c.1 6588795 6596139 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237170   78   X: 6588795-6588872 Caenorhabditis elegans
Exon237171   153   X: 6589822-6589974 Caenorhabditis elegans
Exon237176   63   X: 6592824-6592886 Caenorhabditis elegans
Exon237179   102   X: 6592933-6593034 Caenorhabditis elegans
Exon237182   151   X: 6593082-6593232 Caenorhabditis elegans
Exon237185   162   X: 6593279-6593440 Caenorhabditis elegans
Exon237190   267   X: 6593707-6593973 Caenorhabditis elegans
Exon237193   370   X: 6594658-6595027 Caenorhabditis elegans
Exon237196   159   X: 6595590-6595748 Caenorhabditis elegans
Exon237199   336   X: 6595804-6596139 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28B4.1c.1 6588795 6596139 1

1 Sequence

Length
1841

1 Sequence Ontology Term

Identifier Name Description
transcript