WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25B8.7.1 Sequence Name  C25B8.7.1
Length (nt)  1471   Chromosome Location  X: 6627963-6631537
Chromosome . Primary Identifier  X Chromosome Location . Start  6627963
Chromosome Location . End  6631537 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25B8.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016090 aexr-2 C25B8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25B8.7 C25B8.7 1302   X: 6628063-6628161

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.7.1 6627963 6631537 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237285   199   X: 6627963-6628161 Caenorhabditis elegans
Exon237286   195   X: 6628644-6628838 Caenorhabditis elegans
Exon237287   82   X: 6628890-6628971 Caenorhabditis elegans
Exon237288   98   X: 6629623-6629720 Caenorhabditis elegans
Exon237289   162   X: 6629762-6629923 Caenorhabditis elegans
Exon237290   54   X: 6629965-6630018 Caenorhabditis elegans
Exon237291   64   X: 6630067-6630130 Caenorhabditis elegans
Exon237292   95   X: 6630177-6630271 Caenorhabditis elegans
Exon237293   140   X: 6630316-6630455 Caenorhabditis elegans
Exon237294   148   X: 6630504-6630651 Caenorhabditis elegans
Exon237295   178   X: 6630716-6630893 Caenorhabditis elegans
Exon237296   56   X: 6631482-6631537 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25B8.7.1 6627963 6631537 -1

1 Sequence

Length
1471

1 Sequence Ontology Term

Identifier Name Description
transcript