WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R03E9.3d.1 Sequence Name  R03E9.3d.1
Length (nt)  2646   Chromosome Location  X: 6751434-6761696
Chromosome . Primary Identifier  X Chromosome Location . Start  6751434
Chromosome Location . End  6761696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019844 abts-4 R03E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03E9.3d R03E9.3d 2646   X: 6751434-6751702

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3d.1 6751434 6761696 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237634   269   X: 6751434-6751702 Caenorhabditis elegans
Exon237641   349   X: 6751836-6752184 Caenorhabditis elegans
Exon237645   93   X: 6752715-6752807 Caenorhabditis elegans
Exon237649   122   X: 6752855-6752976 Caenorhabditis elegans
Exon237653   73   X: 6753019-6753091 Caenorhabditis elegans
Exon237657   195   X: 6753138-6753332 Caenorhabditis elegans
Exon237661   149   X: 6753799-6753947 Caenorhabditis elegans
Exon237665   101   X: 6753990-6754090 Caenorhabditis elegans
Exon237669   124   X: 6754141-6754264 Caenorhabditis elegans
Exon237673   119   X: 6754556-6754674 Caenorhabditis elegans
Exon237677   62   X: 6757452-6757513 Caenorhabditis elegans
Exon237681   114   X: 6759141-6759254 Caenorhabditis elegans
Exon237685   145   X: 6759667-6759811 Caenorhabditis elegans
Exon237689   118   X: 6759857-6759974 Caenorhabditis elegans
Exon237693   459   X: 6760020-6760478 Caenorhabditis elegans
Exon237697   105   X: 6761496-6761600 Caenorhabditis elegans
Exon237699   49   X: 6761648-6761696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R03E9.3d.1 6751434 6761696 -1

1 Sequence

Length
2646

1 Sequence Ontology Term

Identifier Name Description
transcript