WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R03E9.4 Sequence Name  R03E9.4
Length (nt)  1635   Chromosome Location  X: 6766579-6766714
Chromosome . Primary Identifier  X Chromosome Location . Start  6766579
Chromosome Location . End  6766714
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R03E9.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47227 IRK-1 61.3 544 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051184
WBRNAi00017358

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R03E9.4 6766579 6766714 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002149 irk-1 R03E9.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R03E9.4 6766579 6766714 -1
CDS:R03E9.4 6767262 6767383 -1
CDS:R03E9.4 6767487 6767666 -1
CDS:R03E9.4 6767717 6768031 -1
CDS:R03E9.4 6768492 6768560 -1
CDS:R03E9.4 6768649 6768784 -1
CDS:R03E9.4 6768840 6768983 -1
CDS:R03E9.4 6769174 6769338 -1
CDS:R03E9.4 6769390 6769464 -1
CDS:R03E9.4 6769803 6769959 -1
CDS:R03E9.4 6772805 6772940 -1

1 Sequence

Length
1635

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R03E9.4.2 R03E9.4.2 2250   X: 6765970-6772946
Transcript:R03E9.4.1 R03E9.4.1 2425   X: 6765970-6778114