WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46H5.7a.1 Sequence Name  F46H5.7a.1
Length (nt)  2068   Chromosome Location  X: 7238666-7242796
Chromosome . Primary Identifier  X Chromosome Location . Start  7238666
Chromosome Location . End  7242796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46H5.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018522 F46H5.7 F46H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46H5.7a F46H5.7a 1719   X: 7239010-7239115

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7a.1 7238666 7242796 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238854   450   X: 7238666-7239115 Caenorhabditis elegans
Exon238856   89   X: 7239163-7239251 Caenorhabditis elegans
Exon238859   160   X: 7239295-7239454 Caenorhabditis elegans
Exon238862   81   X: 7239505-7239585 Caenorhabditis elegans
Exon238866   222   X: 7240087-7240308 Caenorhabditis elegans
Exon238869   222   X: 7240358-7240579 Caenorhabditis elegans
Exon238872   120   X: 7240629-7240748 Caenorhabditis elegans
Exon238875   162   X: 7240801-7240962 Caenorhabditis elegans
Exon238878   217   X: 7241021-7241237 Caenorhabditis elegans
Exon238881   93   X: 7241804-7241896 Caenorhabditis elegans
Exon238884   74   X: 7241989-7242062 Caenorhabditis elegans
Exon238887   139   X: 7242549-7242687 Caenorhabditis elegans
Exon238891   39   X: 7242758-7242796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46H5.7a.1 7238666 7242796 -1

1 Sequence

Length
2068

1 Sequence Ontology Term

Identifier Name Description
transcript