WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:K03A1.5.1 Sequence Name  K03A1.5.1
Length (nt)  2475   Chromosome Location  X: 7301389-7305570
Chromosome . Primary Identifier  X Chromosome Location . Start  7301389
Chromosome Location . End  7305570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03A1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006351 sur-5 K03A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03A1.5 K03A1.5 2103   X: 7301760-7301885

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03A1.5.1 7301389 7305570 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239203   497   X: 7301389-7301885 Caenorhabditis elegans
Exon239204   157   X: 7301932-7302088 Caenorhabditis elegans
Exon239205   310   X: 7302288-7302597 Caenorhabditis elegans
Exon239206   136   X: 7303145-7303280 Caenorhabditis elegans
Exon239207   101   X: 7303336-7303436 Caenorhabditis elegans
Exon239208   167   X: 7303498-7303664 Caenorhabditis elegans
Exon239209   185   X: 7304085-7304269 Caenorhabditis elegans
Exon239210   152   X: 7304313-7304464 Caenorhabditis elegans
Exon239211   324   X: 7304515-7304838 Caenorhabditis elegans
Exon239212   121   X: 7304886-7305006 Caenorhabditis elegans
Exon239213   104   X: 7305092-7305195 Caenorhabditis elegans
Exon239214   221   X: 7305350-7305570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03A1.5.1 7301389 7305570 -1

1 Sequence

Length
2475

1 Sequence Ontology Term

Identifier Name Description
transcript