WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08A9.12.1 Sequence Name  T08A9.12.1
Length (nt)  492   Chromosome Location  X: 7315995-7316818
Chromosome . Primary Identifier  X Chromosome Location . Start  7315995
Chromosome Location . End  7316818 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08A9.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004987 spp-2 T08A9.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08A9.12 T08A9.12 315   X: 7316097-7316159

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.12.1 7315995 7316818 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239226   165   X: 7315995-7316159 Caenorhabditis elegans
Exon239227   327   X: 7316492-7316818 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08A9.12.1 7315995 7316818 -1

1 Sequence

Length
492

1 Sequence Ontology Term

Identifier Name Description
transcript