WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.7.1 Sequence Name  F48E3.7.1
Length (nt)  1478   Chromosome Location  X: 7503780-7506633
Chromosome . Primary Identifier  X Chromosome Location . Start  7503780
Chromosome Location . End  7506633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.7 F48E3.7 1305   X: 7503823-7504041

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.7.1 7503780 7506633 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239611   262   X: 7503780-7504041 Caenorhabditis elegans
Exon239612   158   X: 7504119-7504276 Caenorhabditis elegans
Exon239613   97   X: 7504321-7504417 Caenorhabditis elegans
Exon239614   123   X: 7504683-7504805 Caenorhabditis elegans
Exon239615   108   X: 7504849-7504956 Caenorhabditis elegans
Exon239616   141   X: 7504999-7505139 Caenorhabditis elegans
Exon239617   79   X: 7505212-7505290 Caenorhabditis elegans
Exon239618   155   X: 7505350-7505504 Caenorhabditis elegans
Exon239619   164   X: 7505983-7506146 Caenorhabditis elegans
Exon239621   191   X: 7506443-7506633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F48E3.7.1 7503780 7506633 -1

1 Sequence

Length
1478

1 Sequence Ontology Term

Identifier Name Description
transcript