WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08C6.2a Sequence Name  F08C6.2a
Length (nt)  1089   Chromosome Location  X: 7572357-7572376
Chromosome . Primary Identifier  X Chromosome Location . Start  7572357
Chromosome Location . End  7572376
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30937 PCYT-1, isoform a 41.8 362 Caenorhabditis elegans
 

Other

34 RNAi

WormBase ID
WBRNAi00095559
WBRNAi00043978
WBRNAi00025032
WBRNAi00027260
WBRNAi00012869
WBRNAi00102562
WBRNAi00106099
WBRNAi00097215
WBRNAi00097359
WBRNAi00097372
WBRNAi00087700
WBRNAi00030638
WBRNAi00096942
WBRNAi00086935
WBRNAi00083982
WBRNAi00083998
WBRNAi00102549
WBRNAi00095935
WBRNAi00097350
WBRNAi00096580
WBRNAi00096010
WBRNAi00096331
WBRNAi00102565
WBRNAi00096087
WBRNAi00097305
WBRNAi00114758
WBRNAi00096414
WBRNAi00075848
WBRNAi00096164
WBRNAi00096999

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08C6.2a 7572357 7572376 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017241 pcyt-1 F08C6.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08C6.2a 7572357 7572376 1
CDS:F08C6.2a 7578768 7578976 1
CDS:F08C6.2a 7579240 7579356 1
CDS:F08C6.2a 7579406 7579779 1
CDS:F08C6.2a 7579826 7579963 1
CDS:F08C6.2a 7580504 7580734 1

1 Sequence

Length
1089

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08C6.2a.1 F08C6.2a.1 1410   X: 7572357-7581055