WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08C6.1a.1 Sequence Name  F08C6.1a.1
Length (nt)  3686   Chromosome Location  X: 7586209-7595416
Chromosome . Primary Identifier  X Chromosome Location . Start  7586209
Chromosome Location . End  7595416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.1a F08C6.1a 3063   X: 7586209-7586247

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.1a.1 7586209 7595416 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239986   39   X: 7586209-7586247 Caenorhabditis elegans
Exon239991   76   X: 7588662-7588737 Caenorhabditis elegans
Exon239993   74   X: 7588786-7588859 Caenorhabditis elegans
Exon239995   192   X: 7588905-7589096 Caenorhabditis elegans
Exon239997   255   X: 7589165-7589419 Caenorhabditis elegans
Exon239999   195   X: 7589464-7589658 Caenorhabditis elegans
Exon240001   119   X: 7589779-7589897 Caenorhabditis elegans
Exon240003   147   X: 7589954-7590100 Caenorhabditis elegans
Exon240005   129   X: 7590144-7590272 Caenorhabditis elegans
Exon240007   133   X: 7590481-7590613 Caenorhabditis elegans
Exon240010   100   X: 7591240-7591339 Caenorhabditis elegans
Exon240012   217   X: 7591521-7591737 Caenorhabditis elegans
Exon240014   112   X: 7591792-7591903 Caenorhabditis elegans
Exon240016   102   X: 7591950-7592051 Caenorhabditis elegans
Exon240018   284   X: 7592360-7592643 Caenorhabditis elegans
Exon240020   215   X: 7592693-7592907 Caenorhabditis elegans
Exon240022   137   X: 7593224-7593360 Caenorhabditis elegans
Exon240024   385   X: 7593413-7593797 Caenorhabditis elegans
Exon240028   775   X: 7594642-7595416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.1a.1 7586209 7595416 1

1 Sequence

Length
3686

1 Sequence Ontology Term

Identifier Name Description
transcript