WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C44E12.3a.1 Sequence Name  C44E12.3a.1
Length (nt)  1518   Chromosome Location  X: 7600365-7604408
Chromosome . Primary Identifier  X Chromosome Location . Start  7600365
Chromosome Location . End  7604408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44E12.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006671 twk-17 C44E12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44E12.3a C44E12.3a 1518   X: 7600365-7600466

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3a.1 7600365 7604408 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240039   102   X: 7600365-7600466 Caenorhabditis elegans
Exon240048   121   X: 7600961-7601081 Caenorhabditis elegans
Exon240051   197   X: 7601127-7601323 Caenorhabditis elegans
Exon240058   91   X: 7601854-7601944 Caenorhabditis elegans
Exon240065   168   X: 7602471-7602638 Caenorhabditis elegans
Exon240072   102   X: 7602686-7602787 Caenorhabditis elegans
Exon240079   130   X: 7602852-7602981 Caenorhabditis elegans
Exon240086   256   X: 7603036-7603291 Caenorhabditis elegans
Exon240093   117   X: 7603350-7603466 Caenorhabditis elegans
Exon240100   110   X: 7603513-7603622 Caenorhabditis elegans
Exon240107   124   X: 7604285-7604408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44E12.3a.1 7600365 7604408 -1

1 Sequence

Length
1518

1 Sequence Ontology Term

Identifier Name Description
transcript