WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.6.1 Sequence Name  F27D9.6.1
Length (nt)  1394   Chromosome Location  X: 7661891-7664919
Chromosome . Primary Identifier  X Chromosome Location . Start  7661891
Chromosome Location . End  7664919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000992 dhs-29 F27D9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.6 F27D9.6 1284   X: 7661996-7662098

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.6.1 7661891 7664919 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240177   208   X: 7661891-7662098 Caenorhabditis elegans
Exon240178   173   X: 7662141-7662313 Caenorhabditis elegans
Exon240179   169   X: 7662406-7662574 Caenorhabditis elegans
Exon240180   179   X: 7663058-7663236 Caenorhabditis elegans
Exon240181   88   X: 7663282-7663369 Caenorhabditis elegans
Exon240182   107   X: 7663420-7663526 Caenorhabditis elegans
Exon240183   116   X: 7664258-7664373 Caenorhabditis elegans
Exon240184   124   X: 7664420-7664543 Caenorhabditis elegans
Exon240185   114   X: 7664589-7664702 Caenorhabditis elegans
Exon240186   116   X: 7664804-7664919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27D9.6.1 7661891 7664919 -1

1 Sequence

Length
1394

1 Sequence Ontology Term

Identifier Name Description
transcript