WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F41D9.3f.1 Sequence Name  F41D9.3f.1
Length (nt)  1869   Chromosome Location  X: 8387444-8392589
Chromosome . Primary Identifier  X Chromosome Location . Start  8387444
Chromosome Location . End  8392589 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41D9.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006942 wrk-1 F41D9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F41D9.3f F41D9.3f 1341   X: 8387964-8388043

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3f.1 8387444 8392589 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242045   600   X: 8387444-8388043 Caenorhabditis elegans
Exon242053   318   X: 8388618-8388935 Caenorhabditis elegans
Exon242058   166   X: 8389393-8389558 Caenorhabditis elegans
Exon242062   131   X: 8389612-8389742 Caenorhabditis elegans
Exon242067   24   X: 8390599-8390622 Caenorhabditis elegans
Exon242072   157   X: 8390950-8391106 Caenorhabditis elegans
Exon242076   128   X: 8391206-8391333 Caenorhabditis elegans
Exon242082   106   X: 8392118-8392223 Caenorhabditis elegans
Exon242087   147   X: 8392306-8392452 Caenorhabditis elegans
Exon242092   92   X: 8392498-8392589 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F41D9.3f.1 8387444 8392589 -1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
transcript