WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F16F9.5 Sequence Name  F16F9.5
Length (nt)  2175   Chromosome Location  X: 8466006-8466179
Chromosome . Primary Identifier  X Chromosome Location . Start  8466006
Chromosome Location . End  8466179
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F16F9.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09444 MEC-10 82.4 724 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00089572
WBRNAi00089571
WBRNAi00089574
WBRNAi00089573
WBRNAi00089576
WBRNAi00089575
WBRNAi00089578
WBRNAi00089580
WBRNAi00089570
WBRNAi00089569
WBRNAi00089579
WBRNAi00044809
WBRNAi00013413

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F16F9.5 8466006 8466179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003174 mec-10 F16F9.5 Caenorhabditis elegans

17 Locations


Feature . Primary Identifier
Start End Strand
CDS:F16F9.5 8466006 8466179 -1
CDS:F16F9.5 8466268 8466343 -1
CDS:F16F9.5 8466391 8466519 -1
CDS:F16F9.5 8466737 8466912 -1
CDS:F16F9.5 8467070 8467165 -1
CDS:F16F9.5 8467227 8467387 -1
CDS:F16F9.5 8467653 8467753 -1
CDS:F16F9.5 8467797 8467871 -1
CDS:F16F9.5 8467922 8468004 -1
CDS:F16F9.5 8468054 8468146 -1
CDS:F16F9.5 8468422 8468498 -1
CDS:F16F9.5 8468656 8468725 -1
CDS:F16F9.5 8468829 8469125 -1
CDS:F16F9.5 8469176 8469258 -1
CDS:F16F9.5 8469464 8469585 -1
CDS:F16F9.5 8469832 8469924 -1
CDS:F16F9.5 8469972 8470240 -1

1 Sequence

Length
2175

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F16F9.5.1 F16F9.5.1 2495   X: 8465760-8470314