WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R04E5.8a Sequence Name  R04E5.8a
Length (nt)  2994   Chromosome Location  X: 8802352-8802388
Chromosome . Primary Identifier  X Chromosome Location . Start  8802352
Chromosome Location . End  8802388
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R04E5.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04800 R04E5.8, isoform a 111.9 997 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002313
WBRNAi00051247
WBRNAi00017412

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R04E5.8a 8802352 8802388 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019871 R04E5.8 R04E5.8 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:R04E5.8a 8802352 8802388 -1
CDS:R04E5.8a 8802663 8802948 -1
CDS:R04E5.8a 8803007 8803670 -1
CDS:R04E5.8a 8803725 8804818 -1
CDS:R04E5.8a 8804997 8805145 -1
CDS:R04E5.8a 8805192 8805253 -1
CDS:R04E5.8a 8805302 8805355 -1
CDS:R04E5.8a 8805458 8806105 -1

1 Sequence

Length
2994

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R04E5.8a.1 R04E5.8a.1 3803   X: 8801558-8806120