WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4f.1 Sequence Name  C25A11.4f.1
Length (nt)  5718   Chromosome Location  X: 9082983-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9082983
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4f C25A11.4f 5718   X: 9082983-9083084

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243411   102   X: 9082983-9083084 Caenorhabditis elegans
Exon243416   159   X: 9083903-9084061 Caenorhabditis elegans
Exon243425   110   X: 9087579-9087688 Caenorhabditis elegans
Exon243430   85   X: 9088625-9088709 Caenorhabditis elegans
Exon243436   159   X: 9090104-9090262 Caenorhabditis elegans
Exon243443   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243461   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243471   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243485   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243497   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243511   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243524   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243538   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243553   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243568   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243585   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243601   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243616   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243632   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243646   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243661   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243675   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243690   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243704   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243718   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243732   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243746   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243760   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243769   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4f.1 9082983 9113324 1

1 Sequence

Length
5718

1 Sequence Ontology Term

Identifier Name Description
transcript