WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4a.2 Sequence Name  C25A11.4a.2
Length (nt)  5558   Chromosome Location  X: 9090097-9113613
Chromosome . Primary Identifier  X Chromosome Location . Start  9090097
Chromosome Location . End  9113613 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4a C25A11.4a 4443   X: 9098346-9098640

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243431   166   X: 9090097-9090262 Caenorhabditis elegans
Exon243439   168   X: 9090349-9090516 Caenorhabditis elegans
Exon243456   288   X: 9092285-9092572 Caenorhabditis elegans
Exon243466   71   X: 9095076-9095146 Caenorhabditis elegans
Exon243479   120   X: 9097335-9097454 Caenorhabditis elegans
Exon243491   308   X: 9098333-9098640 Caenorhabditis elegans
Exon243505   119   X: 9100251-9100369 Caenorhabditis elegans
Exon243518   174   X: 9103636-9103809 Caenorhabditis elegans
Exon243532   69   X: 9104668-9104736 Caenorhabditis elegans
Exon243547   114   X: 9105193-9105306 Caenorhabditis elegans
Exon243562   920   X: 9105377-9106296 Caenorhabditis elegans
Exon243578   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243594   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243610   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243626   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243641   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243655   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243670   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243685   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243699   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243713   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243727   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243741   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243755   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243778   464   X: 9113150-9113613 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25A11.4a.2 9090097 9113613 1

1 Sequence

Length
5558

1 Sequence Ontology Term

Identifier Name Description
transcript